CDS

Accession Number TCMCG017C25241
gbkey CDS
Protein Id OMO72298.1
Location complement(join(4459..4923,5043..5452,5563..5594,5782..6059,6259..7595,8492..8813))
GeneID InterPro:IPR001320
Organism Corchorus olitorius
locus_tag COLO4_27700

Protein

Length 947aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215141, BioSample:SAMN03160584
db_source AWUE01019667.1
Definition Ionotropic glutamate receptor [Corchorus olitorius]
Locus_tag COLO4_27700

EGGNOG-MAPPER Annotation

COG_category EPT
Description Glutamate-gated receptor that probably acts as non- selective cation channel
KEGG_TC 1.A.10.1.10,1.A.10.1.18,1.A.10.1.7
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko04040        [VIEW IN KEGG]
KEGG_ko ko:K05387        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0001101        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0004888        [VIEW IN EMBL-EBI]
GO:0005215        [VIEW IN EMBL-EBI]
GO:0005216        [VIEW IN EMBL-EBI]
GO:0005261        [VIEW IN EMBL-EBI]
GO:0005262        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005886        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006811        [VIEW IN EMBL-EBI]
GO:0006812        [VIEW IN EMBL-EBI]
GO:0006816        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0007154        [VIEW IN EMBL-EBI]
GO:0007165        [VIEW IN EMBL-EBI]
GO:0008066        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008324        [VIEW IN EMBL-EBI]
GO:0009266        [VIEW IN EMBL-EBI]
GO:0009409        [VIEW IN EMBL-EBI]
GO:0009507        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0009605        [VIEW IN EMBL-EBI]
GO:0009611        [VIEW IN EMBL-EBI]
GO:0009612        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009719        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0010034        [VIEW IN EMBL-EBI]
GO:0010243        [VIEW IN EMBL-EBI]
GO:0015075        [VIEW IN EMBL-EBI]
GO:0015085        [VIEW IN EMBL-EBI]
GO:0015267        [VIEW IN EMBL-EBI]
GO:0015276        [VIEW IN EMBL-EBI]
GO:0015318        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0019722        [VIEW IN EMBL-EBI]
GO:0019932        [VIEW IN EMBL-EBI]
GO:0022803        [VIEW IN EMBL-EBI]
GO:0022834        [VIEW IN EMBL-EBI]
GO:0022836        [VIEW IN EMBL-EBI]
GO:0022838        [VIEW IN EMBL-EBI]
GO:0022839        [VIEW IN EMBL-EBI]
GO:0022857        [VIEW IN EMBL-EBI]
GO:0022890        [VIEW IN EMBL-EBI]
GO:0023052        [VIEW IN EMBL-EBI]
GO:0030001        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0034220        [VIEW IN EMBL-EBI]
GO:0035556        [VIEW IN EMBL-EBI]
GO:0038023        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0043200        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046677        [VIEW IN EMBL-EBI]
GO:0046873        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0055085        [VIEW IN EMBL-EBI]
GO:0060089        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070417        [VIEW IN EMBL-EBI]
GO:0070588        [VIEW IN EMBL-EBI]
GO:0070838        [VIEW IN EMBL-EBI]
GO:0070887        [VIEW IN EMBL-EBI]
GO:0071214        [VIEW IN EMBL-EBI]
GO:0071229        [VIEW IN EMBL-EBI]
GO:0071230        [VIEW IN EMBL-EBI]
GO:0071236        [VIEW IN EMBL-EBI]
GO:0071260        [VIEW IN EMBL-EBI]
GO:0071310        [VIEW IN EMBL-EBI]
GO:0071311        [VIEW IN EMBL-EBI]
GO:0071417        [VIEW IN EMBL-EBI]
GO:0071495        [VIEW IN EMBL-EBI]
GO:0071496        [VIEW IN EMBL-EBI]
GO:0071944        [VIEW IN EMBL-EBI]
GO:0072511        [VIEW IN EMBL-EBI]
GO:0098655        [VIEW IN EMBL-EBI]
GO:0098660        [VIEW IN EMBL-EBI]
GO:0098662        [VIEW IN EMBL-EBI]
GO:0104004        [VIEW IN EMBL-EBI]
GO:1901698        [VIEW IN EMBL-EBI]
GO:1901699        [VIEW IN EMBL-EBI]
GO:1901700        [VIEW IN EMBL-EBI]
GO:1901701        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGAAGGAGTTCTTGTTGATTTCCAGACTCATGACAAGACCTTTGATTTTTTTGAGTCTTTTGTTCATATGGGTACCCATAGGAGTTTTTTGCCAGACTGGAAATGCATCAGCTTCCTCCAATTCTTCCTCTTCTTTGAGGCCAAAAGTTATAAATATTGGAAGTCTCTTCACTTTGAATTCAGTTATTGGAAGAGCAGCAAGCCCTGCAATTCAGGCTGCTATTGATGATGTCAACTCTGATTTAAGCATTCTTAATGGGGTAGAATTGAAGCACATAGTTCATGATACAAATTGCAGCGGATTTGTTGGAACCGTGGAAGCTTTGCAGCTAATGGAAAGTGATGTTGTTGTTGCAATTGGTCCTCAATCTTCTGGAATAGCTCATGTCATCTCCCATGTTGTTAATGAGCTTCATGTCCCTCTCCTTTCATTTGGAGCTACAGATCCCACTCTTTCTTCCTTGCAGTACCCTTATTTCCTCCGTACTACACATAGTGACTACTTCCAGATGTATGCCATTGCTGATATAGTTGACTATTTTGGGTGGAAGGAGGTCATAGCAATATATGTGGATGATGATTATGGAAGAGGTGGGATTTCTGTTTTGGGAGATGCCCTGGCAAAGAAACGTGCCAAAATTTCTTATAAGGCCGCCTTCAACAGTGGAGACCCCAAAAATAAGATCAATGACTTGCTAGTGGAGGTTAACCTGATGGAGTCAAGAGTTTATGTAGTCCATGTTAATCCTGACACCGGTTTAAATGTTTTTTCTGTTGCTAAGGCTCTTAATATGATGACTGCTGGCTATGTTTGGATTGCTACAGATTGGCTTACTTCATATTTAGATTCAATGGAAGCAGTTGATACTGATACAATGAATCTCTTGCAAGGGGTAGTTGCTCTCCGCCGTTACACCCCAGATACTAAAGTCAAAAAGAGTTTCATTTCTAGGTGGAACAACCTAAAATATAAAGAGAGAGCAGGTCCTGCAGATTTCAATGCTTATGCACTTTTTGCTTATGATTCTGTTTGGTTAGCTGCGCATGCGCTTGAAGTTTTTCTCAATGAAGGTGGAAATGTATCTTTCTCTAATGACCCAAAACTACATGATGAAAAAGGCAGCATGCTGCACCTAGAATCACTTCGTGTGTTTAATGGAGGCCAACAACTTCTGCAAACACTTCTTAGGATGAACTTCACTGGTTTAAGTGGTCAGATTCAATTTACTCCCGATAAAGATTTGGTGCATCCGGCATTTGATGTTCTTAATGTTGGAGGAACTGGGACACGCAGAATTGGTTATTGGTCAAATTATTCCCATCTCTCAATTGTTCCTCCAGAGAGCTTATATGAAAAGCCTGCCAATATCTCTACTGGCAGTCAACATCTTTACAGTGTAATATGGCCTGGTGAAACTACTGCAACACCTAGGGGATGGGTATTCCCAAACAATGGGCAGCCACTTCGAATTGCTGTACCCAACCGGGTAGGCTATAAGGAGTTTGTGTCGAAAGACGACAGTCCCCAGGGTGTAAGAGGATACTGCATTGATGTCTTTGAAGCTGCTATAAACTTGCTCCCTTATGCTGTTCCCCACACATATATCTTATTTGGAGATGGTAAAAAAAATCCTAGCTATAACGATCTTGTTTACCAGAAATTTGATGCAGCAGTTGGAGATATTACAATTGTTACAAACAGGACAAAGATTGTAGATTTTACACAGCCTTATATGGAATCTGGACTTGTCGTTGTTGTTCCGGTCAAAGAAACAAAGTCAAATCCTTGGGCATTCCTCAAGCCATTTACTAGAGAAATGTGGTTCGTCACTGCTGGATTCTTTCTTTTTGTGGGAGCTGTAGTGTGGATTCTTGAACACCGGCTCAATCATGAATTTCGAGGTTCTCCAAGGCAACAGCTTATAACAATTTTTTGGTTTAGCTTCTCAACAATGTTTTTCTCTCACAGAGAAAACACCGTGAGCACTTTGGGACGCTTGGTGCTGATAATATGGCTATTTGTAGTTCTGATTATCAATTCAAGCTACACTGCTAGTTTGACATCAATACTTACAGTGCAGCAGCTGACGTCTGGGATACAAGGGATTGATAGCTTGATCTCAAATAACGAACCTATTGGAATCCAAGAAGGTTCATTCGCATTGAACTATTTGATTGATGAGCTCAACATTGCAGAATCTCGGATAGTTAGGTTAAAAAATCCAGAAGCATATCTCAATGCCCTTGAACTTGGACCAAAGGGGGGTGGTGTAGCTGCCATTGTTGATGAGCTTCCTTACATTGAGCTCTTCTTATCCAACACCAACTGTAAATACCGGACAGTAGGGCAAGAATTTACAAAGAGCGGATGGGGCTTTGCTTTCCAAAGGGACTCGCCTCTTGCGGTTGATCTGTCAACTGCAATCCTTCAGCTCTCAGAAAATGGTGATCTCCAAAAAATCCATAACAAGTGGCTGAAACAAACCGAGTGCTCTATGCAAATCAATGAAGTTGATGAAAACCAACTCGATTTAACTAGCTTTTGGGGCCTATTTCTCATTTGTGGCATTGCATGTGTCTTGGCTCTTATAATGTTCAGCTGGAGAGTCTTTACTCAATACCGCAGATTCAGCCCGGAAGAAGAGGAAGGAAATGCTGTTGAGGAGATGGAGCCTGCACGGTCAGCTAGGCGCTCTATCCGCTCAACGAGCTTTAAGCACTTGATGGACTTTGTAGATAGGAAAGAAATAGAGATTAAGGAAATGCTGAAGAGAAAGAACAGTAATGAAAGCAAAGGGCAGAGTCACCGCAGCATGGATGGACAAACAAGTTCACCTGCATAG
Protein:  
MKEFLLISRLMTRPLIFLSLLFIWVPIGVFCQTGNASASSNSSSSLRPKVINIGSLFTLNSVIGRAASPAIQAAIDDVNSDLSILNGVELKHIVHDTNCSGFVGTVEALQLMESDVVVAIGPQSSGIAHVISHVVNELHVPLLSFGATDPTLSSLQYPYFLRTTHSDYFQMYAIADIVDYFGWKEVIAIYVDDDYGRGGISVLGDALAKKRAKISYKAAFNSGDPKNKINDLLVEVNLMESRVYVVHVNPDTGLNVFSVAKALNMMTAGYVWIATDWLTSYLDSMEAVDTDTMNLLQGVVALRRYTPDTKVKKSFISRWNNLKYKERAGPADFNAYALFAYDSVWLAAHALEVFLNEGGNVSFSNDPKLHDEKGSMLHLESLRVFNGGQQLLQTLLRMNFTGLSGQIQFTPDKDLVHPAFDVLNVGGTGTRRIGYWSNYSHLSIVPPESLYEKPANISTGSQHLYSVIWPGETTATPRGWVFPNNGQPLRIAVPNRVGYKEFVSKDDSPQGVRGYCIDVFEAAINLLPYAVPHTYILFGDGKKNPSYNDLVYQKFDAAVGDITIVTNRTKIVDFTQPYMESGLVVVVPVKETKSNPWAFLKPFTREMWFVTAGFFLFVGAVVWILEHRLNHEFRGSPRQQLITIFWFSFSTMFFSHRENTVSTLGRLVLIIWLFVVLIINSSYTASLTSILTVQQLTSGIQGIDSLISNNEPIGIQEGSFALNYLIDELNIAESRIVRLKNPEAYLNALELGPKGGGVAAIVDELPYIELFLSNTNCKYRTVGQEFTKSGWGFAFQRDSPLAVDLSTAILQLSENGDLQKIHNKWLKQTECSMQINEVDENQLDLTSFWGLFLICGIACVLALIMFSWRVFTQYRRFSPEEEEGNAVEEMEPARSARRSIRSTSFKHLMDFVDRKEIEIKEMLKRKNSNESKGQSHRSMDGQTSSPA